miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|200921533|gb|FD036886.1|FD036886 GAGAAGCGCTTTATGCAGCACAACTCTAAACACACACACACACGCTTAATTAATGTCAGTCACAGAGGATTAATTTACTG
CTTTATCATAGATATGACGACACAGGCCCTTTGTGTGTGCATGTGTGTGTTTATCACCGCGGTAATGATCAGTGTGTCGG
CAGAGCGCTCGTTCTCTATAGACTACAGTAACGACTGCTTCCTGAAAGACGAACAGTATTTCCGCTTTGTTTCCGGCAGT
GTTCATTATTTCCGAGTCCCACGCTGCTATTGGAAGGACAGACTGATGAAGATGTACATGAGCGGCCTCAACGCCATTCA
GGTGTATGTGCCCTGGAACTTCCATGAGCCAGTGCAAGGGGTGTACAACTTTGAGGGGGACAGAGATTTGGAATATTTCC
TCCATCTGGCCAACGAGACGGGCCTGCTGGTGATCCTGAGGCCCGGACCTTACATCTGTGCCGAGTGGGAAATGGGAGGT
CTCCCTGCATGGCTGCTCCACAACCCCAAAATTATCCTGCGGTCAGCAGATTCAGAATACATGCAGGCTGTAGGTGATTG
GTTGGCTGTGCTGCTCATTAAAATGCGGACGTGGCTCTATCAGAATGGTGGGAACATCATCGGTGTGCAGGTGGAAAATG
AGTATGGCAGTTACTTTGCCTGTGATCATAACTACATGCGGTCTCTTCGGTTGCTGTTCCGGAACTTTCTGGGAGAGGAT
GTGGTTCTATTCACCACTGATGGAAAC




Most similar to sp|Q5R7P4|BGAL_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R7P4|BGAL_PONAB Beta-galactosidase OS=Pongo abelii GN=GLB1
           PE=2 SV=1
          Length = 677

 Score =  296 bits (757), Expect = 1e-79
 Identities = 138/196 (70%), Positives = 158/196 (80%)
 Frame = +1

Query: 157 SAERSFSIDYSNDCFLKDEQYFRFVSGSVHYFRVPRCYWKDRLMKMYMSGLNAIQVYVPW 336
           + +R F IDYS DCFLKD Q FR++SGS+HY RVPR YWKDRL+KM M+GLNAIQ YVPW
Sbjct: 27  ATQRMFEIDYSRDCFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPW 86

Query: 337 NFHEPVQGVYNFEGDRDLEYFLHLANETGLLVILRPGPYICAEWEMGGLPAWLLHNPKII 516
           NFHEP  G Y F  D D+EYFL LA+E GLLVILRPGPYICAEWEMGGLPAWLL    I+
Sbjct: 87  NFHEPWPGQYQFSEDHDVEYFLQLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESIL 146

Query: 517 LRSADSEYMQAVGDWLAVLLIKMRTWLYQNGGNIIGVQVENEYGSYFACDHNYMRSLRLL 696
           LRS+D +Y+ AV  WL VLL KM+  LYQNGG +I VQVENEYGSYFACD +Y+R L+  
Sbjct: 147 LRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKC 206

Query: 697 FRNFLGEDVVLFTTDG 744
           FR+ LG+DVVLFTTDG
Sbjct: 207 FRHHLGDDVVLFTTDG 222